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BioLiP
Download all results in tab-seperated text for 45 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1l2a:A (2.5) BS01 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    2 1l2a:A (2.5) BS02 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    3 1l2a:A (2.5) BS03 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    4 1l2a:A (2.5) BS04 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    5 1l2a:A (2.5) BS05 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    6 1l2a:A (2.5) BS06 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    7 1l2a:A (2.5) BS07 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    8 1l2a:A (2.5) BS08 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    9 1l2a:B (2.5) BS01 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    10 1l2a:B (2.5) BS02 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    11 1l2a:B (2.5) BS03 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    12 1l2a:B (2.5) BS04 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    13 1l2a:B (2.5) BS05 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    14 1l2a:B (2.5) BS06 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    15 1l2a:B (2.5) BS07 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    16 1l2a:C (2.5) BS01 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    17 1l2a:C (2.5) BS02 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    18 1l2a:C (2.5) BS03 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    19 1l2a:C (2.5) BS04 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    20 1l2a:C (2.5) BS05 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    21 1l2a:C (2.5) BS06 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    22 1l2a:C (2.5) BS07 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    23 1l2a:C (2.5) BS08 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    24 1l2a:D (2.5) BS01 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    25 1l2a:D (2.5) BS02 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    26 1l2a:D (2.5) BS03 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    27 1l2a:D (2.5) BS04 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    28 1l2a:D (2.5) BS05 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    29 1l2a:D (2.5) BS06 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    30 1l2a:D (2.5) BS07 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    31 1l2a:E (2.5) BS01 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    32 1l2a:E (2.5) BS02 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    33 1l2a:E (2.5) BS03 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    34 1l2a:E (2.5) BS04 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    35 1l2a:E (2.5) BS05 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    36 1l2a:E (2.5) BS06 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    37 1l2a:E (2.5) BS07 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    38 1l2a:E (2.5) BS08 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    39 1l2a:F (2.5) BS01 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    40 1l2a:F (2.5) BS02 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    41 1l2a:F (2.5) BS03 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    42 1l2a:F (2.5) BS04 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    43 1l2a:F (2.5) BS05 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    44 1l2a:F (2.5) BS06 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    45 1l2a:F (2.5) BS07 BGC 3.2.1.176 GO:0004553 ... P0C2S5 12096911
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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