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BioLiP
Download all results in tab-seperated text for 36 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2jd6:0 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    2 2jd6:1 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    3 2jd6:2 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    4 2jd6:3 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    5 2jd6:4 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    6 2jd6:5 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    7 2jd6:6 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    8 2jd6:7 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    9 2jd6:8 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    10 2jd6:9 (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    11 2jd6:A (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    12 2jd6:B (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    13 2jd6:C (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    14 2jd6:D (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    15 2jd6:E (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    16 2jd6:F (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    17 2jd6:G (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    18 2jd6:H (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    19 2jd6:I (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    20 2jd6:J (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    21 2jd6:K (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    22 2jd6:L (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    23 2jd6:M (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    24 2jd6:N (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    25 2jd6:O (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    26 2jd6:P (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    27 2jd6:Q (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    28 2jd6:R (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    29 2jd6:S (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    30 2jd6:T (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    31 2jd6:U (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    32 2jd6:V (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    33 2jd6:W (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    34 2jd6:X (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    35 2jd6:Y (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    36 2jd6:Z (2.75) BS01 FE ? GO:0004322 ... Q8U2T8 17541801
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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