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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 149 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 2wse:1 (3.49) BS01 CLA ? GO:0003729 ... Q01667 19923216
    2 2wse:1 (3.49) BS02 CLA ? GO:0003729 ... Q01667 19923216
    3 2wse:1 (3.49) BS03 CLA ? GO:0003729 ... Q01667 19923216
    4 2wse:1 (3.49) BS04 CLA ? GO:0003729 ... Q01667 19923216
    5 2wse:1 (3.49) BS05 CLA ? GO:0003729 ... Q01667 19923216
    6 2wse:1 (3.49) BS06 CLA ? GO:0003729 ... Q01667 19923216
    7 2wse:1 (3.49) BS07 CLA ? GO:0003729 ... Q01667 19923216
    8 2wse:2 (3.49) BS01 GLC ? GO:0009416 ... Q41038 19923216
    9 2wse:2 (3.49) BS02 CLA ? GO:0009416 ... Q41038 19923216
    10 2wse:2 (3.49) BS03 CLA ? GO:0009416 ... Q41038 19923216
    11 2wse:2 (3.49) BS04 CLA ? GO:0009416 ... Q41038 19923216
    12 2wse:2 (3.49) BS05 CLA ? GO:0009416 ... Q41038 19923216
    13 2wse:2 (3.49) BS06 CLA ? GO:0009416 ... Q41038 19923216
    14 2wse:3 (3.49) BS01 CLA ? GO:0009416 ... C6TEX2 19923216
    15 2wse:3 (3.49) BS02 CLA ? GO:0009416 ... C6TEX2 19923216
    16 2wse:3 (3.49) BS03 CLA ? GO:0009416 ... C6TEX2 19923216
    17 2wse:3 (3.49) BS04 CLA ? GO:0009416 ... C6TEX2 19923216
    18 2wse:3 (3.49) BS05 CLA ? GO:0009416 ... C6TEX2 19923216
    19 2wse:3 (3.49) BS06 CLA ? GO:0009416 ... C6TEX2 19923216
    20 2wse:3 (3.49) BS07 CLA ? GO:0009416 ... C6TEX2 19923216
    21 2wse:4 (3.49) BS01 CLA ? GO:0009416 ... Q9SQL2 19923216
    22 2wse:4 (3.49) BS02 CLA ? GO:0009416 ... Q9SQL2 19923216
    23 2wse:4 (3.49) BS03 CLA ? GO:0009416 ... Q9SQL2 19923216
    24 2wse:4 (3.49) BS04 CLA ? GO:0009416 ... Q9SQL2 19923216
    25 2wse:4 (3.49) BS05 CLA ? GO:0009416 ... Q9SQL2 19923216
    26 2wse:4 (3.49) BS06 CLA ? GO:0009416 ... Q9SQL2 19923216
    27 2wse:4 (3.49) BS07 CLA ? GO:0009416 ... Q9SQL2 19923216
    28 2wse:4 (3.49) BS08 CLA ? GO:0009416 ... Q9SQL2 19923216
    29 2wse:4 (3.49) BS09 CLA ? GO:0009416 ... Q9SQL2 19923216
    30 2wse:4 (3.49) BS10 CLA ? GO:0009416 ... Q9SQL2 19923216
    31 2wse:A (3.49) BS01 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    32 2wse:A (3.49) BS02 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    33 2wse:A (3.49) BS03 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    34 2wse:A (3.49) BS04 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    35 2wse:A (3.49) BS05 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    36 2wse:A (3.49) BS06 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    37 2wse:A (3.49) BS07 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    38 2wse:A (3.49) BS08 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    39 2wse:A (3.49) BS09 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    40 2wse:A (3.49) BS10 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    41 2wse:A (3.49) BS11 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    42 2wse:A (3.49) BS12 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    43 2wse:A (3.49) BS13 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    44 2wse:A (3.49) BS14 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    45 2wse:A (3.49) BS15 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    46 2wse:A (3.49) BS16 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    47 2wse:A (3.49) BS17 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    48 2wse:A (3.49) BS18 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    49 2wse:A (3.49) BS19 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    50 2wse:A (3.49) BS20 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    51 2wse:A (3.49) BS21 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    52 2wse:A (3.49) BS22 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    53 2wse:A (3.49) BS23 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    54 2wse:A (3.49) BS24 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    55 2wse:A (3.49) BS25 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    56 2wse:A (3.49) BS26 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    57 2wse:A (3.49) BS27 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    58 2wse:A (3.49) BS28 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    59 2wse:A (3.49) BS29 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    60 2wse:A (3.49) BS30 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    61 2wse:A (3.49) BS31 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    62 2wse:A (3.49) BS32 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    63 2wse:A (3.49) BS33 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    64 2wse:A (3.49) BS34 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    65 2wse:A (3.49) BS35 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    66 2wse:A (3.49) BS36 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    67 2wse:A (3.49) BS37 PQN 1.97.1.12 GO:0000287 ... P05310 19923216
    68 2wse:A (3.49) BS38 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    69 2wse:A (3.49) BS39 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    70 2wse:A (3.49) BS40 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    71 2wse:A (3.49) BS41 SF4 1.97.1.12 GO:0000287 ... P05310 19923216
    72 2wse:A (3.49) BS42 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    73 2wse:A (3.49) BS43 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    74 2wse:A (3.49) BS44 CLA 1.97.1.12 GO:0000287 ... P05310 19923216
    75 2wse:B (3.49) BS01 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    76 2wse:B (3.49) BS02 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    77 2wse:B (3.49) BS03 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    78 2wse:B (3.49) BS04 SF4 1.97.1.12 GO:0000287 ... P05311 19923216
    79 2wse:B (3.49) BS05 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    80 2wse:B (3.49) BS06 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    81 2wse:B (3.49) BS07 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    82 2wse:B (3.49) BS08 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    83 2wse:B (3.49) BS09 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    84 2wse:B (3.49) BS10 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    85 2wse:B (3.49) BS11 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    86 2wse:B (3.49) BS12 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    87 2wse:B (3.49) BS13 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    88 2wse:B (3.49) BS14 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    89 2wse:B (3.49) BS15 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    90 2wse:B (3.49) BS16 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    91 2wse:B (3.49) BS17 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    92 2wse:B (3.49) BS18 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    93 2wse:B (3.49) BS19 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    94 2wse:B (3.49) BS20 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    95 2wse:B (3.49) BS21 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    96 2wse:B (3.49) BS22 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    97 2wse:B (3.49) BS23 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    98 2wse:B (3.49) BS24 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    99 2wse:B (3.49) BS25 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    100 2wse:B (3.49) BS26 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    101 2wse:B (3.49) BS27 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    102 2wse:B (3.49) BS28 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    103 2wse:B (3.49) BS29 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    104 2wse:B (3.49) BS30 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    105 2wse:B (3.49) BS31 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    106 2wse:B (3.49) BS32 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    107 2wse:B (3.49) BS33 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    108 2wse:B (3.49) BS34 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    109 2wse:B (3.49) BS35 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    110 2wse:B (3.49) BS36 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    111 2wse:B (3.49) BS37 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    112 2wse:B (3.49) BS38 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    113 2wse:B (3.49) BS39 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    114 2wse:B (3.49) BS40 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    115 2wse:B (3.49) BS41 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    116 2wse:B (3.49) BS42 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    117 2wse:B (3.49) BS43 PQN 1.97.1.12 GO:0000287 ... P05311 19923216
    118 2wse:B (3.49) BS44 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    119 2wse:B (3.49) BS45 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    120 2wse:B (3.49) BS46 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    121 2wse:B (3.49) BS47 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    122 2wse:B (3.49) BS48 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    123 2wse:B (3.49) BS49 CLA 1.97.1.12 GO:0000287 ... P05311 19923216
    124 2wse:C (3.49) BS01 SF4 1.97.1.12 GO:0009055 ... P10793 19923216
    125 2wse:C (3.49) BS02 SF4 1.97.1.12 GO:0009055 ... P10793 19923216
    126 2wse:F (3.49) BS01 FRU ? GO:0009507 ... P12355 19923216
    127 2wse:F (3.49) BS02 CLA ? GO:0009507 ... P12355 19923216
    128 2wse:F (3.49) BS03 CLA ? GO:0009507 ... P12355 19923216
    129 2wse:F (3.49) BS04 CLA ? GO:0009507 ... P12355 19923216
    130 2wse:F (3.49) BS05 CLA ? GO:0009507 ... P12355 19923216
    131 2wse:G (3.49) BS01 CLA ? GO:0009507 ... P12357 19923216
    132 2wse:G (3.49) BS02 CLA ? GO:0009507 ... P12357 19923216
    133 2wse:H (3.49) BS01 CLA ? GO:0009507 ... P22179 19923216
    134 2wse:H (3.49) BS02 CLA ? GO:0009507 ... P22179 19923216
    135 2wse:I (3.49) BS01 CLA ? GO:0009507 ... P17227 19923216
    136 2wse:I (3.49) BS02 CLA ? GO:0009507 ... P17227 19923216
    137 2wse:I (3.49) BS03 CLA ? GO:0009507 ... P17227 19923216
    138 2wse:J (3.49) BS01 CLA ? GO:0009507 ... P17230 19923216
    139 2wse:J (3.49) BS02 CLA ? GO:0009507 ... P17230 19923216
    140 2wse:K (3.49) BS01 CLA ? GO:0009507 ... P36886 19923216
    141 2wse:L (3.49) BS01 CLA ? GO:0009507 ... Q41385 19923216
    142 2wse:L (3.49) BS02 CLA ? GO:0009507 ... Q41385 19923216
    143 2wse:L (3.49) BS03 CLA ? GO:0009507 ... Q41385 19923216
    144 2wse:L (3.49) BS04 CLA ? GO:0009507 ... Q41385 19923216
    145 2wse:L (3.49) BS05 CLA ? GO:0009507 ... Q41385 19923216
    146 2wse:L (3.49) BS06 CLA ? GO:0009507 ... Q41385 19923216
    147 2wse:L (3.49) BS07 CLA ? GO:0009507 ... Q41385 19923216
    148 2wse:L (3.49) BS08 CLA ? GO:0009507 ... Q41385 19923216
    149 2wse:L (3.49) BS09 CLA ? GO:0009507 ... Q41385 19923216

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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