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BioLiP
Download all results in tab-seperated text for 125 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4il6:A (2.1) BS01 OER 1.10.3.9 GO:0005506 ... P51765 23426624
    2 4il6:A (2.1) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 23426624
    3 4il6:A (2.1) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    4 4il6:A (2.1) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    5 4il6:A (2.1) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 23426624
    6 4il6:A (2.1) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    7 4il6:A (2.1) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    8 4il6:A (2.1) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 23426624
    9 4il6:A (2.1) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    10 4il6:A (2.1) BS10 PHO 1.10.3.9 GO:0005506 ... P51765 23426624
    11 4il6:B (2.1) BS01 CLA ? GO:0009521 ... D0VWR1 23426624
    12 4il6:B (2.1) BS02 CLA ? GO:0009521 ... D0VWR1 23426624
    13 4il6:B (2.1) BS03 CLA ? GO:0009521 ... D0VWR1 23426624
    14 4il6:B (2.1) BS04 CLA ? GO:0009521 ... D0VWR1 23426624
    15 4il6:B (2.1) BS05 CLA ? GO:0009521 ... D0VWR1 23426624
    16 4il6:B (2.1) BS06 CLA ? GO:0009521 ... D0VWR1 23426624
    17 4il6:B (2.1) BS07 CLA ? GO:0009521 ... D0VWR1 23426624
    18 4il6:B (2.1) BS08 CLA ? GO:0009521 ... D0VWR1 23426624
    19 4il6:B (2.1) BS09 CLA ? GO:0009521 ... D0VWR1 23426624
    20 4il6:B (2.1) BS10 CLA ? GO:0009521 ... D0VWR1 23426624
    21 4il6:B (2.1) BS11 CLA ? GO:0009521 ... D0VWR1 23426624
    22 4il6:B (2.1) BS12 CLA ? GO:0009521 ... D0VWR1 23426624
    23 4il6:B (2.1) BS13 CLA ? GO:0009521 ... D0VWR1 23426624
    24 4il6:B (2.1) BS14 CLA ? GO:0009521 ... D0VWR1 23426624
    25 4il6:B (2.1) BS15 CLA ? GO:0009521 ... D0VWR1 23426624
    26 4il6:B (2.1) BS16 CLA ? GO:0009521 ... D0VWR1 23426624
    27 4il6:C (2.1) BS01 OER ? GO:0005737 ... D0VWR7 23426624
    28 4il6:C (2.1) BS02 CLA ? GO:0005737 ... D0VWR7 23426624
    29 4il6:C (2.1) BS03 CLA ? GO:0005737 ... D0VWR7 23426624
    30 4il6:C (2.1) BS04 CLA ? GO:0005737 ... D0VWR7 23426624
    31 4il6:C (2.1) BS05 CLA ? GO:0005737 ... D0VWR7 23426624
    32 4il6:C (2.1) BS06 CLA ? GO:0005737 ... D0VWR7 23426624
    33 4il6:C (2.1) BS07 CLA ? GO:0005737 ... D0VWR7 23426624
    34 4il6:C (2.1) BS08 CLA ? GO:0005737 ... D0VWR7 23426624
    35 4il6:C (2.1) BS09 CLA ? GO:0005737 ... D0VWR7 23426624
    36 4il6:C (2.1) BS10 CLA ? GO:0005737 ... D0VWR7 23426624
    37 4il6:C (2.1) BS11 CLA ? GO:0005737 ... D0VWR7 23426624
    38 4il6:C (2.1) BS12 CLA ? GO:0005737 ... D0VWR7 23426624
    39 4il6:C (2.1) BS13 CLA ? GO:0005737 ... D0VWR7 23426624
    40 4il6:C (2.1) BS14 CLA ? GO:0005737 ... D0VWR7 23426624
    41 4il6:D (2.1) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    42 4il6:D (2.1) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    43 4il6:D (2.1) BS03 PHO 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    44 4il6:D (2.1) BS04 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    45 4il6:D (2.1) BS05 BCT 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    46 4il6:D (2.1) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    47 4il6:D (2.1) BS07 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    48 4il6:D (2.1) BS08 PHO 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    49 4il6:D (2.1) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    50 4il6:E (2.1) BS01 HEM ? GO:0005506 ... P12238 23426624
    51 4il6:F (2.1) BS01 HEM ? GO:0009523 ... P12239 23426624
    52 4il6:H (2.1) BS01 CLA ? GO:0009523 ... P19052 23426624
    53 4il6:H (2.1) BS02 CLA ? GO:0009523 ... P19052 23426624
    54 4il6:H (2.1) BS03 CLA ? GO:0009523 ... P19052 23426624
    55 4il6:I (2.1) BS01 CLA ? GO:0005737 ... P12240 23426624
    56 4il6:I (2.1) BS02 CLA ? GO:0005737 ... P12240 23426624
    57 4il6:J (2.1) BS01 MG ? GO:0009523 ... Q7DGD4 23426624
    58 4il6:K (2.1) BS01 CLA ? GO:0005737 ... P19054 23426624
    59 4il6:K (2.1) BS02 CLA ? GO:0005737 ... P19054 23426624
    60 4il6:K (2.1) BS03 MG ? GO:0005737 ... P19054 23426624
    61 4il6:V (2.1) BS01 HEM ? GO:0005506 ... P0A387 23426624
    62 4il6:X (2.1) BS01 CLA ? GO:0009523 ... D0VWR4 23426624
    63 4il6:a (2.1) BS01 OER 1.10.3.9 GO:0005506 ... P51765 23426624
    64 4il6:a (2.1) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 23426624
    65 4il6:a (2.1) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    66 4il6:a (2.1) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    67 4il6:a (2.1) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    68 4il6:a (2.1) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 23426624
    69 4il6:a (2.1) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 23426624
    70 4il6:a (2.1) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    71 4il6:a (2.1) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 23426624
    72 4il6:a (2.1) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 23426624
    73 4il6:b (2.1) BS01 CLA ? GO:0009521 ... D0VWR1 23426624
    74 4il6:b (2.1) BS02 CLA ? GO:0009521 ... D0VWR1 23426624
    75 4il6:b (2.1) BS03 CLA ? GO:0009521 ... D0VWR1 23426624
    76 4il6:b (2.1) BS04 CLA ? GO:0009521 ... D0VWR1 23426624
    77 4il6:b (2.1) BS05 CLA ? GO:0009521 ... D0VWR1 23426624
    78 4il6:b (2.1) BS06 CLA ? GO:0009521 ... D0VWR1 23426624
    79 4il6:b (2.1) BS07 CLA ? GO:0009521 ... D0VWR1 23426624
    80 4il6:b (2.1) BS08 CLA ? GO:0009521 ... D0VWR1 23426624
    81 4il6:b (2.1) BS09 CLA ? GO:0009521 ... D0VWR1 23426624
    82 4il6:b (2.1) BS10 CLA ? GO:0009521 ... D0VWR1 23426624
    83 4il6:b (2.1) BS11 CLA ? GO:0009521 ... D0VWR1 23426624
    84 4il6:b (2.1) BS12 CLA ? GO:0009521 ... D0VWR1 23426624
    85 4il6:b (2.1) BS13 CLA ? GO:0009521 ... D0VWR1 23426624
    86 4il6:b (2.1) BS14 CLA ? GO:0009521 ... D0VWR1 23426624
    87 4il6:b (2.1) BS15 CLA ? GO:0009521 ... D0VWR1 23426624
    88 4il6:b (2.1) BS16 CLA ? GO:0009521 ... D0VWR1 23426624
    89 4il6:c (2.1) BS01 OER ? GO:0005737 ... D0VWR7 23426624
    90 4il6:c (2.1) BS02 CLA ? GO:0005737 ... D0VWR7 23426624
    91 4il6:c (2.1) BS03 CLA ? GO:0005737 ... D0VWR7 23426624
    92 4il6:c (2.1) BS04 CLA ? GO:0005737 ... D0VWR7 23426624
    93 4il6:c (2.1) BS05 CLA ? GO:0005737 ... D0VWR7 23426624
    94 4il6:c (2.1) BS06 CLA ? GO:0005737 ... D0VWR7 23426624
    95 4il6:c (2.1) BS07 CLA ? GO:0005737 ... D0VWR7 23426624
    96 4il6:c (2.1) BS08 CLA ? GO:0005737 ... D0VWR7 23426624
    97 4il6:c (2.1) BS09 CLA ? GO:0005737 ... D0VWR7 23426624
    98 4il6:c (2.1) BS10 CLA ? GO:0005737 ... D0VWR7 23426624
    99 4il6:c (2.1) BS11 CLA ? GO:0005737 ... D0VWR7 23426624
    100 4il6:c (2.1) BS12 CLA ? GO:0005737 ... D0VWR7 23426624
    101 4il6:c (2.1) BS13 CLA ? GO:0005737 ... D0VWR7 23426624
    102 4il6:c (2.1) BS14 CLA ? GO:0005737 ... D0VWR7 23426624
    103 4il6:d (2.1) BS01 FE2 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    104 4il6:d (2.1) BS02 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    105 4il6:d (2.1) BS03 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    106 4il6:d (2.1) BS04 PHO 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    107 4il6:d (2.1) BS05 PHO 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    108 4il6:d (2.1) BS06 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    109 4il6:d (2.1) BS07 BCT 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    110 4il6:d (2.1) BS08 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    111 4il6:d (2.1) BS09 CLA 1.10.3.9 GO:0009523 ... D0VWR8 23426624
    112 4il6:e (2.1) BS01 HEM ? GO:0005506 ... P12238 23426624
    113 4il6:f (2.1) BS01 HEM ? GO:0009523 ... P12239 23426624
    114 4il6:h (2.1) BS01 CLA ? GO:0009523 ... P19052 23426624
    115 4il6:h (2.1) BS02 CLA ? GO:0009523 ... P19052 23426624
    116 4il6:h (2.1) BS03 CLA ? GO:0009523 ... P19052 23426624
    117 4il6:h (2.1) BS04 CLA ? GO:0009523 ... P19052 23426624
    118 4il6:i (2.1) BS01 CLA ? GO:0005737 ... P12240 23426624
    119 4il6:j (2.1) BS01 MG ? GO:0009523 ... Q7DGD4 23426624
    120 4il6:k (2.1) BS01 CLA ? GO:0005737 ... P19054 23426624
    121 4il6:k (2.1) BS02 CLA ? GO:0005737 ... P19054 23426624
    122 4il6:k (2.1) BS03 MG ? GO:0005737 ... P19054 23426624
    123 4il6:v (2.1) BS01 HEM ? GO:0005506 ... P0A387 23426624
    124 4il6:x (2.1) BS01 CLA ? GO:0009523 ... D0VWR4 23426624
    125 4il6:y (2.1) BS01 CLA ? GO:0009523 ... D0VWR3 23426624
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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