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BioLiP
Download all results in tab-seperated text for 92 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4n3e:A (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    2 4n3e:A (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    3 4n3e:A (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    4 4n3e:A (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    5 4n3e:A (2.43) BS05 2AN ? GO:0004864 ... Q8H1L1 24531481
    6 4n3e:B (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    7 4n3e:B (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    8 4n3e:B (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    9 4n3e:B (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    10 4n3e:B (2.43) BS05 2AN ? GO:0004864 ... Q8H1L1 24531481
    11 4n3e:C (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    12 4n3e:C (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    13 4n3e:C (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    14 4n3e:D (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    15 4n3e:D (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    16 4n3e:E (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    17 4n3e:E (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    18 4n3e:E (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    19 4n3e:E (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    20 4n3e:E (2.43) BS05 2AN ? GO:0004864 ... Q8H1L1 24531481
    21 4n3e:E (2.43) BS06 2AN ? GO:0004864 ... Q8H1L1 24531481
    22 4n3e:F (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    23 4n3e:G (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    24 4n3e:G (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    25 4n3e:G (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    26 4n3e:G (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    27 4n3e:G (2.43) BS05 2AN ? GO:0004864 ... Q8H1L1 24531481
    28 4n3e:H (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    29 4n3e:H (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    30 4n3e:H (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    31 4n3e:I (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    32 4n3e:I (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    33 4n3e:I (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    34 4n3e:I (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    35 4n3e:J (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    36 4n3e:J (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    37 4n3e:J (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    38 4n3e:K (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    39 4n3e:K (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    40 4n3e:K (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    41 4n3e:K (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    42 4n3e:L (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    43 4n3e:L (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    44 4n3e:L (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    45 4n3e:L (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    46 4n3e:M (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    47 4n3e:M (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    48 4n3e:M (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    49 4n3e:N (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    50 4n3e:N (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    51 4n3e:N (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    52 4n3e:O (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    53 4n3e:O (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    54 4n3e:P (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    55 4n3e:P (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    56 4n3e:P (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    57 4n3e:Q (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    58 4n3e:Q (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    59 4n3e:Q (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    60 4n3e:R (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    61 4n3e:R (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    62 4n3e:R (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    63 4n3e:R (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    64 4n3e:S (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    65 4n3e:S (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    66 4n3e:U (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    67 4n3e:U (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    68 4n3e:U (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    69 4n3e:U (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    70 4n3e:U (2.43) BS05 2AN ? GO:0004864 ... Q8H1L1 24531481
    71 4n3e:V (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    72 4n3e:V (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    73 4n3e:W (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    74 4n3e:W (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    75 4n3e:W (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    76 4n3e:W (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    77 4n3e:X (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    78 4n3e:X (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    79 4n3e:X (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    80 4n3e:Y (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    81 4n3e:Y (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    82 4n3e:Y (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    83 4n3e:Z (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    84 4n3e:Z (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    85 4n3e:Z (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    86 4n3e:Z (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    87 4n3e:a (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    88 4n3e:a (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    89 4n3e:b (2.43) BS01 2AN ? GO:0004864 ... Q8H1L1 24531481
    90 4n3e:b (2.43) BS02 2AN ? GO:0004864 ... Q8H1L1 24531481
    91 4n3e:b (2.43) BS03 2AN ? GO:0004864 ... Q8H1L1 24531481
    92 4n3e:b (2.43) BS04 2AN ? GO:0004864 ... Q8H1L1 24531481
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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