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I-TASSER I-TASSER-MTD C-I-TASSER QUARK C-QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH Threpp BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign CR-I-TASSER GPCR-I-TASSER MAGELLAN BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

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GPCR-RD is a database for experimental restaints of GPCRs. Although no solved X-ray or NMR structure is available for most GPCR sequences, numerous experiments have been performed on GPCRs to identify the critical residues and motifs. Experimental restraints were systematically collected from the literature using an automated text mining algorithm combined with manual validation, with the purpose of assisting GPCR 3-D structure modeling and function annotation. The GPCR-RD data are useful for GPCR 3D structure modeling, such as the GPCR-I-TASSER algorithm. The flow chart below summarizes the procedure for the extraction of experimental data and spatial restraints from literature and other resources.

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11002 entries in GPCR-RD.
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GPCR-RD: GPCR experimental restaint database
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Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data Swiss-Prot ID Experimental Data
gnrhr_mouse S153A gnrhr_mouse K154Q gnrhr_mouse E156Q
gnrhr_mouse L265R gnrhr_mouse E301Q gnrhr_rat C14A
gnrhr_rat C114A gnrhr_rat S140F gnrhr_rat C195A
gnrhr_rat C199A gnrhr_rat T238A gnrhr_rat S253A
gnrhr_rat T264A gnrhr_rat V299A gnrhr_rat S326Y
gnrr2_human T7R gnrr2_claga L7W gnrr2_claga D304A
gnrr2_claga D304E gnrr2_claga D304N gnrr2_claga H354D
gnrr2_claga A366E gnrr2_claga G371D trfr_human N167I
trfr_mouse N110A trfr_mouse S113A trfr_mouse R123A
trfr_mouse C179A trfr_mouse C179S trfr_mouse Y181F
trfr_mouse R185A trfr_mouse N186A trfr_mouse R261A
trfr_mouse R261E trfr_mouse R261Q trfr_mouse K262A
trfr_mouse K262E trfr_mouse K262Q trfr_mouse Q263E
trfr_mouse Q263R trfr_mouse N289A trfr_mouse N289D
trfr_mouse S290A trfr_mouse F296A trfr_mouse E298A
trfr_mouse E298F trfr_rat N110D trfr_rat Y181F
trfr_rat Y188A trfr_rat F196A trfr_rat N289A
trfr_rat N289D trfr_rat N289E trfr_rat S290A
trfr_rat C335S trfr_rat C337S trfr_rat T365A
trfr_rat T371A trfr_rat S383A ghsr_human C116A
ghsr_human E124D ghsr_human E124Q ghsr_human H280F  [Orientation Restraint]
ghsr_rat E352K 5ht1a_human P16L 5ht1a_human A17P
5ht1a_human G22S 5ht1a_human I28V 5ht1a_human A50V  [Orientation Restraint]
5ht1a_human C109R 5ht1a_human P184L 5ht1a_human R220L
5ht1a_human K228R 5ht1a_human G273D 5ht1a_human L381F  [Orientation Restraint]
5ht1a_human K418N 5ht1a_mouse C417S 5ht1a_mouse C420S
5ht1d_cavpo T100I 5ht1d_cavpo R102H 5ht2b_human K44A
5ht2b_human D100N  [Orientation Restraint] 5ht2b_human D135A  [Orientation Restraint] 5ht2b_human S139A  [Orientation Restraint]
5ht2b_human R169E 5ht2b_human A187S  [Orientation Restraint] 5ht2b_human S222A  [Orientation Restraint]
5ht2b_human P229A  [Orientation Restraint] 5ht2b_human E363A 5ht2b_human R393X
5ht4r_mouse R118A 5ht4r_mouse T134A 5ht4r_mouse A258L


Reference:

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