LOMETS (Local Meta-Threading-Server) is an on-line web service for protein structure prediction. It generates 3D models by collecting high-scoring target-to-template alignments from 8 locally-installed threading programs (FUGUE, HHsearch, MUSTER, PPA, PROSPECT2, SAM-T02, SPARKS, SP3). A detailed description of the server can been seen in the Readme file.

The output of LOMETS includes (see an illustrative example):

  • The best 10 threading models selected from 160 models by the confidence score
  • Top 10 target-template alignments of individual threading servers
  • Prediction of spatial C-alpha and side-chain contact and distance map
  • Full-length models built by MODELLER guided by consensus restraints

Download LOMETS Package

Cut and paste your sequence here (in FASTA format):

Or upload the sequence from your local computer:

Email: (mandatory, where results will be sent to)

ID: (optional, your given name of the protein)


Reference:
S. Wu, Y. Zhang. LOMETS: A local meta-threading-server for protein structure prediction. Nucleic Acids Research 2007; 35: 3375-3382 (download the PDF file).

Click here to download the benchmark set of 620 non-redundant proteins used by LOMETS.

 


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