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Computational redesigning of all proteins in Mycobacterium Tuberculosis

This page includes protein sequences redesigned by the evolutionary based method (EBM) on 243 solved proteins from Mycobacterium Tuberculosis genome which is the second highest cause of death from infectious diseases. Details can be found at P Mitra, D Shultis, Y Zhang. A threading-based approach to de novo protein design and the case study on Mycobacterium Tuberculosis proteins. 2012 (Submitted).

Explanations:


ID Chain Length Design Model
1D0I A 150 Designed Model
1DF7 A 159 Designed Model
1DT0 A 197 Designed Model
1F0N A 284 Designed Model
1G2O A 262 Designed Model
1GTV A 208 Designed Model
1I9G A 264 Designed Model
1IDS A 198 Designed Model
1IM5 A 179 Designed Model
1J7S B 146 Designed Model
1J7W A 141 Designed Model
1J7Y B 146 Designed Model
1K44 A 135 Designed Model
1L1E A 272 Designed Model
1L4U A 165 Designed Model
1LMI A 131 Designed Model
1LU4 A 134 Designed Model
1N3N B 99 Designed Model
1NAZ A 154 Designed Model
1NBU A 118 Designed Model
1NBU C 118 Designed Model
1NFF A 244 Designed Model
1NGK A 126 Designed Model
1NXJ A 156 Designed Model
1P3H A 99 Designed Model
1P9L A 245 Designed Model
1PM4 A 117 Designed Model
1PQW A 183 Designed Model
1PZS A 171 Designed Model
1QPO A 284 Designed Model
1R88 A 267 Designed Model
1S8N A 190 Designed Model
1TFU A 157 Designed Model
1TPY A 285 Designed Model
1U2P A 156 Designed Model
1U5H A 223 Designed Model
1UVH A 157 Designed Model
1UZR A 282 Designed Model
1W19 A 147 Designed Model
1W5R A 273 Designed Model
1W66 A 218 Designed Model
1W74 A 171 Designed Model
1WQG A 184 Designed Model
1X89 A 174 Designed Model
1XZ0 A 271 Designed Model
1XZ0 B 98 Designed Model
1Y0H A 101 Designed Model
1Y25 A 165 Designed Model
1YK3 A 198 Designed Model
1YK9 A 184 Designed Model
1YLK A 163 Designed Model
1ZNW A 182 Designed Model
2A11 A 154 Designed Model
2A15 A 133 Designed Model
2A6P A 193 Designed Model
2AQ6 A 143 Designed Model
2B70 A 162 Designed Model
2BM5 A 183 Designed Model
2C2X A 280 Designed Model
2C45 A 113 Designed Model
2C92 A 147 Designed Model
ID Chain Length Design Model
2CDN A 186 Designed Model
2CGQ A 74 Designed Model
2CHC A 169 Designed Model
2FR2 A 161 Designed Model
2FVH A 99 Designed Model
2G2D A 160 Designed Model
2G38 A 77 Designed Model
2G4R A 153 Designed Model
2GLN A 128 Designed Model
2H7M A 268 Designed Model
2H7V A 178 Designed Model
2I1U A 108 Designed Model
2IB0 A 142 Designed Model
2IG3 A 127 Designed Model
2IVM A 147 Designed Model
2JFR A 234 Designed Model
2NM3 A 121 Designed Model
2NTV A 268 Designed Model
2O03 A 129 Designed Model
2O7G A 88 Designed Model
2O8X A 61 Designed Model
2PMU A 98 Designed Model
2Q7Y B 98 Designed Model
2QRW A 126 Designed Model
2QVB A 296 Designed Model
2QXX A 189 Designed Model
2QZ8 A 146 Designed Model
2R5U A 144 Designed Model
2V2X A 275 Designed Model
2V2X B 100 Designed Model
2VE6 A 276 Designed Model
2VE6 B 99 Designed Model
2VG0 A 227 Designed Model
2VKL A 77 Designed Model
2VLR D 199 Designed Model
2VLR E 240 Designed Model
2VVP A 157 Designed Model
2VVR A 147 Designed Model
2VZW A 146 Designed Model
2W25 A 147 Designed Model
2W29 A 147 Designed Model
2W3B A 185 Designed Model
2W3G A 150 Designed Model
2W6X A 154 Designed Model
2W72 A 141 Designed Model
2W72 B 146 Designed Model
2WT9 A 207 Designed Model
2WUG A 283 Designed Model
2WWO A 158 Designed Model
2WZM A 274 Designed Model
2X89 A 128 Designed Model
2XB9 A 158 Designed Model
2XPG A 274 Designed Model
2XW7 A 175 Designed Model
2XWL A 221 Designed Model
2Y88 A 244 Designed Model
2YW6 A 148 Designed Model
2Z2I A 179 Designed Model
2Z90 A 161 Designed Model
2ZFZ A 77 Designed Model
2ZHX B 82 Designed Model
ID Chain Length Design Model
2ZYQ A 296 Designed Model
3A2G A 154 Designed Model
3AJX A 207 Designed Model
3ASE A 154 Designed Model
3C4I A 99 Designed Model
3C57 A 51 Designed Model
3D0S A 224 Designed Model
3D55 A 68 Designed Model
3DWG C 92 Designed Model
3E3U A 196 Designed Model
3EUL A 123 Designed Model
3F8L A 162 Designed Model
3F8M A 230 Designed Model
3F9R A 246 Designed Model
3FAV A 74 Designed Model
3FAV B 72 Designed Model
3FGN A 230 Designed Model
3G1M A 194 Designed Model
3G5O A 92 Designed Model
3G5O B 81 Designed Model
3GWK C 98 Designed Model
3GWM A 129 Designed Model
3H5J A 168 Designed Model
3H6P C 56 Designed Model
3H81 A 256 Designed Model
3H87 A 136 Designed Model
3HC7 A 252 Designed Model
3HGB A 134 Designed Model
3HH2 A 109 Designed Model
3HNT H 220 Designed Model
3HNT L 214 Designed Model
3HSS A 274 Designed Model
3HST B 139 Designed Model
3HUG A 80 Designed Model
3HUG B 62 Designed Model
3HX9 A 101 Designed Model
3HZA A 162 Designed Model
3I4O A 68 Designed Model
3I7T A 118 Designed Model
3I86 A 136 Designed Model
3ICO A 244 Designed Model
3IJF X 123 Designed Model
3IOS A 134 Designed Model
3K3C A 152 Designed Model
3K6Y A 227 Designed Model
3KNH B 234 Designed Model
3KNH E 150 Designed Model
3KNH F 101 Designed Model
3KNH G 155 Designed Model
3KNH H 138 Designed Model
3KNH I 127 Designed Model
3KNH J 98 Designed Model
3KNH K 119 Designed Model
3KNH N 60 Designed Model
3KNH P 83 Designed Model
3KNH S 78 Designed Model
3KNH T 99 Designed Model
3KNI 2 71 Designed Model
3KNI 6 50 Designed Model
3KNI 7 48 Designed Model
3KNI D 271 Designed Model
ID Chain Length Design Model
3KNI E 204 Designed Model
3KNI F 207 Designed Model
3KNI G 181 Designed Model
3KNI H 163 Designed Model
3KNI N 138 Designed Model
3KNI O 122 Designed Model
3KNI P 146 Designed Model
3KNI Q 141 Designed Model
3KNI R 117 Designed Model
3KNI S 98 Designed Model
3KNI U 117 Designed Model
3KNI V 101 Designed Model
3KNI W 113 Designed Model
3KNI X 92 Designed Model
3KNI Y 100 Designed Model
3L60 A 229 Designed Model
3LHD A 253 Designed Model
3M6C A 194 Designed Model
3MAY A 86 Designed Model
3MOY A 258 Designed Model
3MPZ A 125 Designed Model
3MXU A 134 Designed Model
3MYB A 259 Designed Model
3NB5 A 257 Designed Model
3NBK A 158 Designed Model
3NDO A 225 Designed Model
3NE0 A 208 Designed Model
3NE3 B 129 Designed Model
3NFW A 179 Designed Model
3NY4 A 265 Designed Model
3OC6 A 243 Designed Model
3OCC A 237 Designed Model
3ODG A 273 Designed Model
3OL3 A 98 Designed Model
3ONR A 71 Designed Model
3P0T A 136 Designed Model
3P2J A 191 Designed Model
3PGX A 270 Designed Model
3PK0 A 260 Designed Model
3PKA A 284 Designed Model
3PL1 A 185 Designed Model
3PO8 A 98 Designed Model
3PPI A 258 Designed Model
3PVV A 96 Designed Model
3QD8 A 172 Designed Model
3QHA A 277 Designed Model
3QJ7 A 260 Designed Model
3QK8 A 259 Designed Model
3QKA A 233 Designed Model
3QUA A 179 Designed Model
3QXZ A 259 Designed Model
3R0O A 262 Designed Model
3R20 A 217 Designed Model
3R2N A 119 Designed Model
3R9Q A 233 Designed Model
3R9T A 260 Designed Model
3RFQ A 154 Designed Model
3RIH A 260 Designed Model
3SBX A 177 Designed Model
3TDT A 274 Designed Model
.

Click and download the zip file of all targets.


Reference:

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