QUARK Ab Initio Results for HOKE_ECOLI


  Submitted Primary Sequence

>Length 50
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
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--------10--------20--------30--------40--------50
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
CCHHHHHHHHHHHHHHHHCCEEEECCEEEEEEEECCCCEEEEEEEETTTT
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--------10--------20--------30--------40--------50
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
53331010000000011110100003100101034331202000022366
12345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.506 to 2ffgA
SCOP code=d.317.1.1
TM-score=0.490 to 1seiA
SCOP code=d.140.1.1
TM-score=0.503 to 1hueA
SCOP code=a.55.1.1
TM-score=0.476 to 2hr2A
SCOP code=a.118.8.8
TM-score=0.522 to 1maeH
SCOP code=b.69.2.1
Estimated TM-score of Model 1: 0.5639 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.6170 ±0.0778