QUARK Ab Initio Results for PSIF_ECOLI


  Submitted Primary Sequence

>Length 106
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA
CHHHHHHHHHHHHHHHCTTTTTTTTCCHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHTTTTTTTCTTTTCCCHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA
4421100000000000121122342223212102201221233423131112001100433332323432222221032022312533131321130012014325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.570 to 2pmrA
SCOP code=a.8.11.1
TM-score=0.530 to 2go7C
SCOP code=c.108.1.6
TM-score=0.556 to 1mw7A
SCOP code=e.39.1.1
TM-score=0.551 to 2eucA
SCOP code=a.249.1.1
TM-score=0.475 to 2i5uA
SCOP code=a.275.1.1
Estimated TM-score of Model 1: 0.3722 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4119 ±0.0778