QUARK Ab Initio Results for YACL_ECOLI


  Submitted Primary Sequence

>Length 120
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK
CCEEEEETTTTTEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEETTTTTEEEETTTTTTEEEETTTTTTTTTTHHHHHHHTTTTTHTTTTHHHHHHHHHHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK
532101112212010100210100010013204321200220020022132232102120210101012110002012132223202200211233110000020012002102212443
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.480 to 1jyoA
SCOP code=d.198.1.1
TM-score=0.488 to 2o6kB
SCOP code=a.60.15.1
TM-score=0.453 to 1ig7A
SCOP code=a.4.1.1
TM-score=0.459 to 1sqfA
SCOP code=a.79.1.3
TM-score=0.459 to 1kmhA
SCOP code=a.69.1.1
Estimated TM-score of Model 1: 0.3209 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3570 ±0.0778