QUARK Ab Initio Results for YAFO_ECOLI


  Submitted Primary Sequence

>Length 132
MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF
CCECCHHHHHHHHCHHHHHHHHHHHHHHTTTTCCTTTTTTTTCCCTTTTHHHHHHHHHEEEETTTTTTTTTTTTEEEEETTTTTEEEETTTTTTTTTEEEEETTTTTTHHHHCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF
442121321223122320210020011033321012100321213111212001102100010023333133312100121320000002001232000000002130121121220032003002213433
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.459 to 2c27A
SCOP code=d.108.1.1
TM-score=0.475 to 1j3wB
SCOP code=d.110.7.1
TM-score=0.445 to 1dxxA
SCOP code=a.40.1.1
TM-score=0.454 to 1exsA
SCOP code=b.60.1.1
TM-score=0.414 to 2o3gA
SCOP code=d.145.1.4
Estimated TM-score of Model 1: 0.3078 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3431 ±0.0778