QUARK Ab Initio Results for YBBC_ECOLI

Submitted Primary Sequence

>Length 122
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK
CCHHHHHHHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHTTTTEEHHHHCCCHHHHHHHHHEEEEECCCHHHHHHTTTTEETTTTTTEEEECEECTTTTTTCEEEEEEETTTTCEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK
55121010000000001013011111321110021014232321203201321210020010002211033003423111012123000020121224221000001012430100101236
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.509 to 2grmA SCOP code=a.35.1.11	TM-score=0.479 to 1xksA SCOP code=b.69.14.1	TM-score=0.488 to 1e3hA SCOP code=a.4.9.1	TM-score=0.479 to 1tndA SCOP code=a.66.1.1	TM-score=0.498 to 3dbyT SCOP code=a.29.13.1

Estimated TM-score of Model 1: 0.3078 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3430 ±0.0778