QUARK Ab Initio Results for YBGS_ECOLI


  Submitted Primary Sequence

>Length 126
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCTTTTCHHHHHTTTTCTTTTHHCCCCCCCTTTTCTTTTTTTTTTTTTTTCTTTTTCHHHHHHCCCTTTTTTTTTTTCCCTTTTTTTTTCTTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ
551220011000000000000010122123233020200121021023022101222121210111221222123222232311132222312203314012223312223122222323232335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.474 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.478 to 1et1A
SCOP code=j.15.1.1
TM-score=0.474 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.462 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.472 to 2r2vA
SCOP code=h.1.3.1
Estimated TM-score of Model 1: 0.2980 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3325 ±0.0778