QUARK Ab Initio Results for YEDR_ECOLI

Submitted Primary Sequence

>Length 121
MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGALLGSIAWYTRPRPARSRRYE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGALLGSIAWYTRPRPARSRRYE
CTTTTTTEEEEEEETTTTTEEETTTTHHHHHHHCCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTTTTTTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHETTTTCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGALLGSIAWYTRPRPARSRRYE
5540201000000010201020111223112312322201000000000000000000000000010231211123112111002000000000000000000000001122322424435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.555 to 1s35A SCOP code=a.7.1.1	TM-score=0.528 to 1fbvA SCOP code=a.39.1.7	TM-score=0.565 to 1z0pA SCOP code=a.2.18.1	TM-score=0.512 to 1ghhA SCOP code=d.57.1.1	TM-score=0.525 to 1fbvA SCOP code=a.39.1.7

Estimated TM-score of Model 1: 0.3468 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3847 ±0.0778