QUARK Ab Initio Results for YFDO_ECOLI

Submitted Primary Sequence

>Length 122
MTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG
CHHHHHHHHHHHHHHHHHHHTTTTTTTTTTTTTHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTTTTTTTTTTTHHHHHHHHHHHHHHHCTTTTCCTTTTCCTTTTTTTTTTTTTCCTTTTCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG
44002101310010032013122322423212021002001100321322131003001101513010210100330131022001312422223233433222322233132230122244
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.520 to 2i5uA SCOP code=a.275.1.1	TM-score=0.523 to 2i5uA SCOP code=a.275.1.1	TM-score=0.470 to 1ffyA SCOP code=a.27.1.1	TM-score=0.518 to 2ofpB SCOP code=a.100.1.7	TM-score=0.529 to 2aplA SCOP code=a.258.1.1

Estimated TM-score of Model 1: 0.3805 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4208 ±0.0778