QUARK Ab Initio Results for YFFR_ECOLI

Submitted Primary Sequence

>Length 130
MKVLGNILWWAFVGFMAYATLIKPDNTDPAVVNYEEPLPMELANYGEPGEGAKIMNAAKIMGRDYAWKHVKEDRLPCLFAAGVVADNILVKYHFSNETEFKLKAAAVRECANVAENNGFVLVGRVFEKRN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKVLGNILWWAFVGFMAYATLIKPDNTDPAVVNYEEPLPMELANYGEPGEGAKIMNAAKIMGRDYAWKHVKEDRLPCLFAAGVVADNILVKYHFSNETEFKLKAAAVRECANVAENNGFVLVGRVFEKRN
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTTTTHHHHHHHCCTTTTHHHHHHHHHHHCHHHHHHTTTTCCCHHHHHHHHHTTTTEEEEETTTTHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKVLGNILWWAFVGFMAYATLIKPDNTDPAVVNYEEPLPMELANYGEPGEGAKIMNAAKIMGRDYAWKHVKEDRLPCLFAAGVVADNILVKYHFSNETEFKLKAAAVRECANVAENNGFVLVGRVFEKRN
4421011001000000001211223322210122332021101412230301100100311022100321332302001000101330001020222221111110021002004310000112012346
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.469 to 1ahvA SCOP code=d.58.32.1	TM-score=0.528 to 1m12A SCOP code=a.64.1.1	TM-score=0.494 to 1e3hA SCOP code=a.4.9.1	TM-score=0.496 to 2ou3A SCOP code=a.287.1.1	TM-score=0.479 to 1wu3I SCOP code=a.26.1.3

Estimated TM-score of Model 1: 0.3419 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3795 ±0.0778