QUARK Ab Initio Results for YGAM_ECOLI


  Submitted Primary Sequence

>Length 113
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
CCHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
52332132123111331122014102300310230043223313220320132023003302331323220130023001001200442010000000000000000122434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.596 to 1c17M
SCOP code=f.18.1.1
TM-score=0.569 to 2bvlA
SCOP code=c.68.1.22
TM-score=0.542 to 2hguK
SCOP code=d.99.1.1
TM-score=0.648 to 2d2sA
SCOP code=a.118.17.2
TM-score=0.576 to 1skvA
SCOP code=a.30.5.1
Estimated TM-score of Model 1: 0.4626 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5086 ±0.0778