QUARK Ab Initio Results for YGEF_ECOLI


  Submitted Primary Sequence

>Length 148
MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLSIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRHNKEKNKRHSTLLKNPLFNFH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLSIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRHNKEKNKRHSTLLKNPLFNFH
CCCCTTTTTCCCTTTTCCCCTTTTTTTTTCCCCEEEEETTTTCHHHHHHCCCEEETTTTEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLSIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRHNKEKNKRHSTLLKNPLFNFH
5434323321112211333333334333422110201012111101122021210223010100301220022000101100202023200100021002013123312122011001310132023323311331121131212334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.541 to 1ug3A
SCOP code=a.118.1.14		 TM-score=0.495 to 2ou3A
SCOP code=a.287.1.1		 TM-score=0.567 to 1r5qA
SCOP code=a.186.1.1		 TM-score=0.511 to 1ug3A
SCOP code=a.118.1.14		 TM-score=0.505 to 2hyeC
SCOP code=a.4.5.34
Estimated TM-score of Model 1: 0.3077 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3429 ±0.0778