QUARK Ab Initio Results for YGFX_ECOLI


  Submitted Primary Sequence

>Length 135
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR
CCCEETTTTECHHHHHHHHHHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHCCEEETTTTTEEETTTTTEETTTTTTTTTTTEEEEEECTTTTEEEEEETTTTTCHHHHHHHHHHTTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR
443110112101111000000100000001002122211100000000001200322231322101010123120102121000011110040000010223323210000001313321012004111334334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.490 to 2c2lA
SCOP code=a.118.8.1
TM-score=0.498 to 2aplA
SCOP code=a.258.1.1
TM-score=0.460 to 1tfeA
SCOP code=d.43.1.1
TM-score=0.492 to 2aplA
SCOP code=a.258.1.1
TM-score=0.450 to 1q3tA
SCOP code=c.37.1.1
Estimated TM-score of Model 1: 0.3399 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3773 ±0.0778