QUARK Ab Initio Results for YJGW_ECOLI

Submitted Primary Sequence

>Length 111
MIRKNKWLRFQTVCRYIPLSLKNHNRLVIFVCQRIEWRYIFSTNTGHPLKNTCEMTGTDFSTDGLMRRYVTGGNNQWHTVASLHMTIMMNRIGTVADRQPKARKVKHGEMT
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MIRKNKWLRFQTVCRYIPLSLKNHNRLVIFVCQRIEWRYIFSTNTGHPLKNTCEMTGTDFSTDGLMRRYVTGGNNQWHTVASLHMTIMMNRIGTVADRQPKARKVKHGEMT
TTTTTTEEEEEEEEEEEEETTTTTCEEEEEEEEEEEEEEEEETTTTTTTTTTEEEETTTTCCCHHHHHHTTTTTTCHHHHHHHHHHHHHHHHCCHHCCTTTTTTTTTTTTT
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRKNKWLRFQTVCRYIPLSLKNHNRLVIFVCQRIEWRYIFSTNTGHPLKNTCEMTGTDFSTDGLMRRYVTGGNNQWHTVASLHMTIMMNRIGTVADRQPKARKVKHGEMT
554432102010000001010433110000000101000000131212031101000111212000100011121100000000000001200112122242332432335
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.515 to 1p4pA SCOP code=b.76.1.1	TM-score=0.510 to 2jfgA SCOP code=c.5.1.1	TM-score=0.518 to 2i5hA SCOP code=e.71.1.1	TM-score=0.522 to 1vqzA SCOP code=d.224.1.3	TM-score=0.496 to 2gpiA SCOP code=d.354.1.1

Estimated TM-score of Model 1: 0.3060 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3411 ±0.0778