QUARK Ab Initio Results for YMGG_ECOLI

Submitted Primary Sequence

>Length 114
MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK
CCCEEEEEHHHHHHHHCCHHTTTTTTCTTTTTTTTTTTEEETTTTTEETTTTTETTTTTEECTTTTTTTTTCCTTTTTTTEEEEEEEEETTTTTTTEEEEEETTTTTTEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKKILAFGLISALFCSTPAMADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEKGRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK
542211010100001010221022332130000000000010110200020000010000012413313313310200000000000011210200020000102211011225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.410 to 1maeH SCOP code=b.69.2.1	TM-score=0.482 to 3ci0I SCOP code=d.24.1.7	TM-score=0.413 to 1vhgA SCOP code=d.113.1.1	TM-score=0.447 to 3elgA SCOP code=d.98.2.1	TM-score=0.459 to 1ly7A SCOP code=d.82.2.1

Estimated TM-score of Model 1: 0.2572 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.2889 ±0.0778