QUARK Ab Initio Results for YPDI_ECOLI


  Submitted Primary Sequence

>Length 91
MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR
CCHHHHHHHHHHHHHHHHHCEEEEEECCTTTTTTTTTTCCCCEEEECTTTTCCHHHHHHHHHTTTTTTCCCTTTTTTTCCTTTTTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR
5411011111000000000000000012222332243233221011222232222210001133311203123311131223120001224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.444 to 1zaoA
SCOP code=a.4.5.56
TM-score=0.494 to 1iugA
SCOP code=c.67.1.3
TM-score=0.434 to 3bzkA
SCOP code=a.60.2.6
TM-score=0.467 to 1r6tA
SCOP code=a.16.1.3
TM-score=0.460 to 1gntA
SCOP code=e.26.1.1
Estimated TM-score of Model 1: 0.2859 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3196 ±0.0778