QUARK Ab Initio Results for YPJK_ECOLI

Submitted Primary Sequence

>Length 78
MPVIAIIAIVIIVIILNKTGVSDSLTALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK
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--------10--------20--------30--------40--------50--------60--------70

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MPVIAIIAIVIIVIILNKTGVSDSLTALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK
CCEEEEEEEEEEEETTTTTTCCHHHHHHHHHHHHHHHTTTTTTTTEEEEECCTTTTEEEEEEEEEEHHHHHHHHTTTT
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPVIAIIAIVIIVIILNKTGVSDSLTALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK
331000000000000003220221000000000000011111100000000110100000000000002002112334
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.500 to 1iruV SCOP code=d.153.1.4	TM-score=0.509 to 1yuwA SCOP code=b.130.1.1	TM-score=0.493 to 1sxjE SCOP code=a.80.1.1	TM-score=0.475 to 4hb1A SCOP code=k.8.1.1	TM-score=0.513 to 2ewbA SCOP code=c.50.1.1

Estimated TM-score of Model 1: 0.3882 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4291 ±0.0778