QUARK Ab Initio Results for LSPA_ECOLI


  Submitted Primary Sequence

>Length 164
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
CCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTEEEETTTTEEEEEETTTTEEEETTTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTEEEEEECCTTTTTTEEHHHHHHHHHHHHHHHHHHHTTTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSRAKKQ
55432222000000000000001100100012202212101002000000021210000001211110100000000000000000013142222100000000000000100010010000000000001010000000000000000000010012232444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.479 to 1j30A
SCOP code=a.25.1.1
TM-score=0.476 to 2b3tB
SCOP code=e.38.1.1
TM-score=0.493 to 1e84A
SCOP code=a.24.3.2
TM-score=0.476 to 1cf7B
SCOP code=a.4.5.17
TM-score=0.496 to 2d2sA
SCOP code=a.118.17.2
Estimated TM-score of Model 1: 0.3524 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3908 ±0.0778