QUARK Ab Initio Results for YAAA_ECOLI

Submitted Primary Sequence

>Length 258
MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR
CEEEETTTTCCTTTTTTTCTTTTCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHCCTTTTTCHHHHHHHHHHHHHHHHHHCCCCCTTTTCHHHHHHCCCTTTTTTTCHHHHHHHHHHHHHHHHHHHCCCCEEETTTTHHHHHHTTTTTTCTTTTEEEEEETTTTTEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHCCTTTTEEECHHHCTTTTEEEETTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR
200000003223242222224221130131022003203401131013014023300110021022123312213010001002010120021320233012101200100000000021122021100212231322413201200030002101200222231000000022013003333232200100002235220210001023010100100032312213103202220000133112321110222336
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.426 to 2o3lA SCOP code=a.69.4.1	TM-score=0.428 to 1r6tA SCOP code=a.16.1.3	TM-score=0.463 to 1a38A SCOP code=a.118.7.1	TM-score=0.421 to 1h0nA SCOP code=a.25.1.2	TM-score=0.417 to 1ji6A SCOP code=b.18.1.3

Estimated TM-score of Model 1: 0.3257 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3621 ±0.0778