QUARK Ab Initio Results for YAFT_ECOLI

Submitted Primary Sequence

>Length 261
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTPQQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTPQQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ
CCCCEHHHHHHHHHHHTTTTTTTTTTHHCCCCCCCCCCCTTTTCHHCCTTTTTTTCTTTTTCHHHHHHHHHCCCCCCTTTTCEEEEECTTTTTTHHHHHHHHHCEEEEETTTTTTTTCCCTTTTTTTTTTTTHHHHHCCCCHHHHHHHHHHHCTTTTEEEEECHHHHTTTTTCCCEEEEETTTTTCTTTTCEEEEEEEEEEETTTTTCEEEECCCTTTTTTTCCTTTTTTTTTCCCCHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

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Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTPQQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ
553220001000000011012322133333313233231142023202332011221212012310210132332302132100002122302221012213200100102212333322212333343332211112222012001000131323000000010220323211110000213234033221000001000000120100110222233321232233332222422331023113210310032014325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.370 to 1sqfA SCOP code=a.79.1.3	TM-score=0.372 to 2hcfA SCOP code=c.108.1.6	TM-score=0.360 to 1wzaA SCOP code=b.71.1.1	TM-score=0.350 to 1t11A SCOP code=a.223.1.1	TM-score=0.393 to 2r2vA SCOP code=h.1.3.1

Estimated TM-score of Model 1: 0.2837 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3172 ±0.0778