QUARK Ab Initio Results for YAHL_ECOLI

Submitted Primary Sequence

>Length 271
MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFHILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEYHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFHILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEYHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL
CTTTTCTTTTCTTTTHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCTTTTCCCCEEEEEETTTTTTHHHHCTTTTTCHHHHHHHHHCTTTTEEEETTTTTTTEHHHHTTTTCHHHHHHHHHHHHHHTTTTEEEETTTTTTHHHHTTTTHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCTTTTTTTTTTTEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFHILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEYHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL
5532312233111111210121033331233023100200200100022113111203321132220000000032032133200000010120100010110131202000200332301000112331000030102112120022002002203220100002110100210231320110220033123134230201200020000003301200230000000100102213221202200111022013321113320102225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.401 to 1j7xA SCOP code=c.14.1.2	TM-score=0.421 to 2j5yA SCOP code=a.8.1.2	TM-score=0.417 to 1g6uA SCOP code=k.9.1.1	TM-score=0.414 to 2c0sA SCOP code=a.30.7.1	TM-score=0.430 to 1lbuA SCOP code=a.20.1.1

Estimated TM-score of Model 1: 0.3407 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3782 ±0.0778