QUARK Ab Initio Results for YFCO_ECOLI


  Submitted Primary Sequence

>Length 273
MKILRWLFALVMLIATTEAMAAGHSVDVYYGYNGDSRNIATFNLKIMMPSAVYVGEYKSSQWLMTGEILQNVSWSGPPPAPSVKLIGYHQNINKASCPGLPSGWNCGYYTFEVIVSAEIESYFSCPWLVIMNDSEASPGGVTYQGPDSHDTICPSVSVQPYDVSWNENYVSKSKLLTLQSTGGVVEKTLSTYLMKDGKLCDSTQMNETGGYCRWVAQMITFTASGCDKAEVSVTPNRHPITDKQLHDMVVRVDTSSMQPIDSTCRFQYILNEL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKILRWLFALVMLIATTEAMAAGHSVDVYYGYNGDSRNIATFNLKIMMPSAVYVGEYKSSQWLMTGEILQNVSWSGPPPAPSVKLIGYHQNINKASCPGLPSGWNCGYYTFEVIVSAEIESYFSCPWLVIMNDSEASPGGVTYQGPDSHDTICPSVSVQPYDVSWNENYVSKSKLLTLQSTGGVVEKTLSTYLMKDGKLCDSTQMNETGGYCRWVAQMITFTASGCDKAEVSVTPNRHPITDKQLHDMVVRVDTSSMQPIDSTCRFQYILNEL
CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECTTTTTTEEEEEEEEETTTTEEEEEEETTTTEETTTTTEEEEECCTTTTCEEEEETTTTCCTTTTTTTTCCCCEEEEEEEEEEETTTTCCTTTTTEEEEEEEEEECCTTTTECTTTTTTTCTTTTCCTTTTCTTTTTEEEEEEEEEETTTTCEEEEEEEEEETTTTTECCCCCTTTTCCEEEETTTTTEEEEETTTTTEEEETTTTCCCCCCEEEEEEEEEETTTTCCCCCEEEEEEETTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKILRWLFALVMLIATTEAMAAGHSVDVYYGYNGDSRNIATFNLKIMMPSAVYVGEYKSSQWLMTGEILQNVSWSGPPPAPSVKLIGYHQNINKASCPGLPSGWNCGYYTFEVIVSAEIESYFSCPWLVIMNDSEASPGGVTYQGPDSHDTICPSVSVQPYDVSWNENYVSKSKLLTLQSTGGVVEKTLSTYLMKDGKLCDSTQMNETGGYCRWVAQMITFTASGCDKAEVSVTPNRHPITDKQLHDMVVRVDTSSMQPIDSTCRFQYILNEL
431110000000000011012112101000012232320000002000121010010212311020310100001113200202011133213302031032101001010100011313221200000000102013221112023233120121102112011211101201001021210102210000003302002223223210000000200001011033020101224121222100000010113322213110101100335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.368 to 2hr2A
SCOP code=a.118.8.8
TM-score=0.354 to 1xxpA
SCOP code=c.45.1.2
TM-score=0.349 to 1et1A
SCOP code=j.15.1.1
TM-score=0.392 to 2fh5B
SCOP code=c.37.1.8
TM-score=0.367 to 2dmfA
SCOP code=d.20.1.3
Estimated TM-score of Model 1: 0.2791 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3123 ±0.0778