QUARK Ab Initio Results for YGJP_ECOLI

Submitted Primary Sequence

>Length 167
MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKVEIRVATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQNKI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKVEIRVATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQNKI
CTTTTTTTTCCHHHHHHHHHHHTTTTTHHHHHHHTTTTCCCCCHHHHHHHHHHHHHHHTTTTCCCCEEETTTTTTHHHHHHHHHHHHHHHHTTTTTTTTTEEHHHHHHHCCHHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHTTTTHHHHHHHHHHHHHHHHCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKVEIRVATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQNKI
55413203111330021032004222102100430122231210200120022012210441320110012321210220000110102222230313110100100330133003000001002132331231002000311121320121020001012224344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.515 to 1anvA SCOP code=a.54.1.1	TM-score=0.455 to 1fazA SCOP code=a.133.1.3	TM-score=0.445 to 1wixA SCOP code=a.40.3.1	TM-score=0.501 to 2v4jC SCOP code=d.203.1.1	TM-score=0.472 to 3d19A SCOP code=a.29.13.1

Estimated TM-score of Model 1: 0.3050 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3400 ±0.0778