QUARK Ab Initio Results for YHAB_ECOLI


  Submitted Primary Sequence

>Length 179
MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVLSAITALNFYHGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSITSDCWQILFFSPDHFNNDFY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVLSAITALNFYHGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSITSDCWQILFFSPDHFNNDFY
TTTTCEEEETTTTTTCHHHHHHTTTTTTCHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEECTTTTTTTEETTTTCCCCCEEEEEETTTTTTCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTTTTTTTTTTCEEEETTTTTTCCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVLSAITALNFYHGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSITSDCWQILFFSPDHFNNDFY
55313111001120120200022132201111011101300323213201201220230010000010121301100020224321100000121432110010010121021132010221233113003310230012011121011211112322022100100001232234524
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.488 to 2o8pA
SCOP code=a.118.7.1		 TM-score=0.468 to 1vb5B
SCOP code=c.124.1.5		 TM-score=0.412 to 1fcfA
SCOP code=b.36.1.3		 TM-score=0.451 to 1vmgA
SCOP code=a.204.1.2		 TM-score=0.415 to 2r2vA
SCOP code=h.1.3.1
Estimated TM-score of Model 1: 0.2924 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3266 ±0.0778