QUARK Ab Initio Results for YIBJ_ECOLI

Submitted Primary Sequence

>Length 233
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFAS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFAS
CHHHHHHHHHHTTTTTTTTTEEEECTTTTCHHHHHHHCTTTTTTTTEEEEEEETTTTCEEETTTTTTCEEEEEEETTTTTEETTTTTTTCCTTTTTTTTEETTTTCCEEEEETTTTTTTTCEEECCCCCTTTTTTTEEETTTTCCCETTTTCCCCCTTTTTTTTTTTTTTTTTTTTEEEEETTTTHHHHTTTTTTTCHHHHHHHHHHTTTTTTTTEEEEETTTTTTTTCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFAS
54113212120113422220110002121102102221232222222000000012001100014301001001112212002333232122202010121133111000100001121010013112114212000000101011000300030311231321110123121211000102002210220132112031002102111213321101001022133332224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.385 to 1vdwA SCOP code=e.7.1.1	TM-score=0.379 to 1fpsA SCOP code=a.128.1.1	TM-score=0.403 to 1pgjA SCOP code=a.100.1.1	TM-score=0.373 to 1fokA SCOP code=a.4.5.12	TM-score=0.371 to 1qcfA SCOP code=b.34.2.1

Estimated TM-score of Model 1: 0.2962 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3306 ±0.0778