QUARK Ab Initio Results for YJBM_ECOLI

Submitted Primary Sequence

>Length 235
MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK
CHHHHHTTTTTTHHCCCHHHHHHHHHHHHHHHHHHHHCTTTTTTTTCCHHHEEEEEETTTTTTTHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHCTTTTTCCEEETTTTTHHHHHHHCCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK
4213201320223202223000100110001000110012233431110320001021433022101101231323220020002000200010010023233210210000001000110011002112133202200311123012310431011023012223020300011012103323221310120230033002003201332332020022113001101223244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.469 to 1sv1A SCOP code=a.186.1.1	TM-score=0.482 to 3dbyT SCOP code=a.29.13.1	TM-score=0.489 to 2d2sA SCOP code=a.118.17.2	TM-score=0.495 to 1keyB SCOP code=a.118.16.1	TM-score=0.505 to 2d2sA SCOP code=a.118.17.2

Estimated TM-score of Model 1: 0.3352 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3724 ±0.0778