QUARK Ab Initio Results for YJFM_ECOLI

Submitted Primary Sequence

>Length 212
MARKRKSRNNSKIGHGAISRIGRPNNPFEPCRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MARKRKSRNNSKIGHGAISRIGRPNNPFEPCRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG
CCCCCCCTTTTTTTTTEEETTTTTTTTCTTTTTTTTTTHHHHHHHHHHHHHHHHCCCCCTTTTTTTTTTETTTTHHHHHCCCCHHHHHHHHHHHHHHHHHHCTTTTCHHHHHHHCCCCCTTTTCCCHHHHHHHHHHHHTTTTTTTTTCTTTTTTTCCCCTTTTTTTTTTTCTTTTCECCTTTTCCTTTTTTTTEEECTTTTCTTTTTTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MARKRKSRNNSKIGHGAISRIGRPNNPFEPCRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG
55333324333322100011122232323322332122100000000000000300232232323230201210210144135121013002301210123023322131012413302132222000000000000201333332221222212121231112112131122102022312212222233101013112132212213333
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.396 to 1rktA SCOP code=a.4.1.9	TM-score=0.391 to 1lvlA SCOP code=c.3.1.5	TM-score=0.392 to 1mzgA SCOP code=d.224.1.1	TM-score=0.425 to 2eucA SCOP code=a.249.1.1	TM-score=0.405 to 1gpjA SCOP code=a.151.1.1

Estimated TM-score of Model 1: 0.2793 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3125 ±0.0778