QUARK Ab Initio Results for YJIC_ECOLI

Submitted Primary Sequence

>Length 276
MSMPLSNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKSVVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHATTELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYKVIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSMPLSNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKSVVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHATTELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYKVIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK
TTTTTTHHHHHHHTTTTTTTTTTTCCHHHHHHHHHHHTTTTTTEETTTTTTTTTTTTTTTEEEEEEEETTTTTTTTTHHHHHHHHHCCEEECCCHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTTTTTTTEEEEEETTTTTTTTTTCCEEEEEEECTTTTTTTCTTTTCCEEEEEEEEEEEECCCCCHHHHHHHHHHCTTTTTTTTEEEEETTTTTHHHHHHCCCEECCTTTTTCTTTTECCCCCCHHHHHTTTTCEETTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSMPLSNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKSVVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHATTELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYKVIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK
552312311211011212102112022300210211213232000010221331303131001011011233311111002002312101020311122030111003000110210200110021021101122212324311001010011020121201100000102132143123321300000000000101211100000000202130121010001012110301131012102223303032121222201301313311001115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.475 to 1kd9A SCOP code=h.1.3.1	TM-score=0.490 to 2r2vA SCOP code=h.1.3.1	TM-score=0.483 to 1rh4A SCOP code=k.17.1.1	TM-score=0.490 to 1et1A SCOP code=j.15.1.1	TM-score=0.459 to 1kd9A SCOP code=h.1.3.1

Estimated TM-score of Model 1: 0.2764 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3094 ±0.0778