QUARK Ab Initio Results for YJJA_ECOLI


  Submitted Primary Sequence

>Length 164
MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLEKLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLEKLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTTTTTTTTHHHHHHTTTTTTCCTTTTTTTTHHHHHHHHHCTTTTTTTHHHHHHHHHHHCCTTTTCCCCCHHHHHHHHHHHETTTTTEETTTTTTTTHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNSTTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLEKLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGLNFIS
53321211100000000000000100201100110033114332223321201200120022223102231221010001000223102233032012201531222233343222112101000323312201033122230033012300210132024225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.541 to 1et1A
SCOP code=j.15.1.1
TM-score=0.521 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.525 to 1et1A
SCOP code=j.15.1.1
TM-score=0.508 to 1ldjA
SCOP code=a.4.5.34
TM-score=0.497 to 2hguK
SCOP code=d.99.1.1
Estimated TM-score of Model 1: 0.3291 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3658 ±0.0778