QUARK Ab Initio Results for YMFA_ECOLI

Submitted Primary Sequence

>Length 153
MSQDSKVFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKDGSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSQDSKVFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKDGSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP
CTTTTHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHCCCCEEEEEEEEECCCTTTTTTTTCEEEEEEEETTTTTEEEEETTTTTTTTTTTTTTTEEEEETTTTTTTETTTTTHHHHHHHHHHTTTTHHHHHHHHHHHTTTTHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQDSKVFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKDGSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP
554323111200100000101000000111110033023120100101121222342243210000000113342201011211121231230120100011312320102100000010000000000000000001122233233334344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.474 to 1t1mC SCOP code=i.1.1.1	TM-score=0.444 to 1l3pA SCOP code=a.24.17.1	TM-score=0.483 to 2oo2A SCOP code=a.8.11.1	TM-score=0.491 to 1t3qC SCOP code=d.87.2.1	TM-score=0.437 to 2b5dX SCOP code=a.8.3.3

Estimated TM-score of Model 1: 0.3053 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3404 ±0.0778