QUARK Ab Initio Results for YNCI_ECOLI

Submitted Primary Sequence

>Length 374
MSIQSLLDYISVTPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAMGCQKDIASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIVSNVTRLNFCDFEFEWKGLKKLCVALSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRIRRGNAAEIISGIKKMALNLLRDCKDIKGEEEKKEGCVKHRERSSEVHFLY
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSIQSLLDYISVTPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAMGCQKDIASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIVSNVTRLNFCDFEFEWKGLKKLCVALSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRIRRGNAAEIISGIKKMALNLLRDCKDIKGEEEKKEGCVKHRERSSEVHFLY
CCHHHHHHHHHCCCCCTTTTTTTTTCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCTTTTCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHTTTTTTTCEEETTTTCTTTTTTTTTTCCCEEEEEEEETTTTTTCEEEECTTTTTCHHHHHHHCCCCTTTTTEEETTTTTTTHHHHHHHHHCCCCEEEETTTTTHHHHHHHHHHHHHHHCTTTTTTTTTCTTTTCCCCEEEEEEETTTTTTTTTTTTTTHHHHCEEEEEEEEEETTTTTTTCEEEEEEEEEECTTTTHHHHHHHHHHHHHHHCCTTTTTTTTTTCCTTTTTTTTHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTHHHHHHHHCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSIQSLLDYISVTPDIRQQGKVKHKLSAILFLTVCAVIAGADEWQEIEDFGHERLEWLKKYGDFDNGIPVDDTIARVVSNIDSLAFEKMFIEWMQECHEITDGEIIAIDGKTIRGSFDKGKRKGAIHMVSAFSNENGVVLGQVKTEAKSNEITAIPELLNLLYLKKNLITIDAMGCQKDIASKIKDKKADYLLAVKGNQGKLHHAFEEKFPVNVFSNYKGDSFSTQEISHGRKETRLHIVSNVTRLNFCDFEFEWKGLKKLCVALSFRQKKEDKSAEGVSIRYYISSKDMDAKEFAHAIRAHWLIEHSLHWVLDVKMNEDASRIRRGNAAEIISGIKKMALNLLRDCKDIKGEEEKKEGCVKHRERSSEVHFLY
45131012002203123332414030010000000000010330310110021112001310313210122110010112021210120012002302421302000010311212133244311000000001321001000203232211200130022121321010010100232001202334110000022112201200121011221232313212233223122110000002123131131313021112100000022344442221010000000232213100200110010132121012120322203023110010000002000100331332312222111013233200111113
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.374 to 1wy6A SCOP code=a.118.20.1	TM-score=0.374 to 1xdzA SCOP code=c.66.1.20	TM-score=0.365 to 1xkgA SCOP code=d.3.1.1	TM-score=0.378 to 1sxjD SCOP code=a.80.1.1	TM-score=0.372 to 1xkgA SCOP code=d.3.1.1

Estimated TM-score of Model 1: 0.3593 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3982 ±0.0778