QUARK Ab Initio Results for YOBD_ECOLI

Submitted Primary Sequence

>Length 152
MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCEEEEEEETTTTCCCHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHCCCEEEEETTTTEEEEEEEEHHHHHEEEETTTTEEEEETTTTTEEEECCCHHHHHHHHHHHTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ
45120000000000000000001001132312100101012324110000000000000110232222010000000000000001121010002230000000002012020020133100001024220002032230023003111234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.481 to 1r5zA SCOP code=f.40.1.1	TM-score=0.440 to 1zvrA SCOP code=b.55.1.8	TM-score=0.470 to 2qzgB SCOP code=a.29.14.1	TM-score=0.462 to 2gq3A SCOP code=c.1.13.1	TM-score=0.479 to 2ga5A SCOP code=d.82.2.1

Estimated TM-score of Model 1: 0.3370 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3743 ±0.0778