Template-based Modeling Results for LPFS_ECOLI


  Submitted Primary Sequence

>Length 28
MRNLQPNMSRWAFFAKSVGTWNKSSCRS
1234567890123456789012345678
--------10--------20
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRNLQPNMSRWAFFAKSVGTWNKSSCRS
CCCCCCCHHHHHHHHHHHCCCCCCCCCC
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Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRNLQPNMSRWAFFAKSVGTWNKSSCRS
5542212122000002001113322144
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--------10--------20
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRNLQPNMSRWAFFAKSVGTWNKSSCRS
1MUSTER1bahA0.2861.0001.424threading_1FTNVSCTTSKWSVCQRLHNTMNKKRCYS
2SPARKS2npic0.3500.7141.221threading_2SRNWYLSDSQWAAFKDDEIT--------
3PPA-I1bahA0.2861.0001.165threading_3FTNVSCTTSKWSVCQRLHNTMNKKRCYS
4MUSTER2jodB0.1431.0001.226threading_4YSRYRKQMAVKKYLAAVLGKRYKQRVKN
5SPARKS1lir_0.1431.0001.187threading_5QESCTASNQCWSICKRLHNTNRNKKCRC
6PPA-I1ba6A0.2590.9641.144threading_6DSGYEVHHQKLVFFAEDVGS-NKGAIIG
7MUSTER1ba6A0.2590.9641.224threading_7RHDSEVHHQKLVFFAEDVGS-NKGAIIG
8SPARKS1scy_0.2000.8931.051threading_8---AFCNLRMCQLSCRSLGIGDKCECVK
9PPA-I2jodB0.1431.0001.120threading_9YSRYRKQMAVKKYLAAVLGKRYKQRVKN
10MUSTER1c2uA0.4000.8931.200threading_10-RSIDPK-SR-AFQCKHSAKYRLSFCRK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.361 to 1bahA
SCOP code=g.3.7.2
TM-score=0.570 to 1amlA
SCOP code=j.42.1.1
TM-score=0.364 to 1jggA
SCOP code=a.4.1.1
TM-score=0.361 to 1bahA
SCOP code=g.3.7.2
TM-score=0.512 to 2jodB
SCOP code=j.6.1.1