Template-based Modeling Results for HIPB_ECOLI

Submitted Primary Sequence

>Length 88
MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW
5532342311310120022014423121220033031322001202343321201000100310311010022432333323443244
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW
1	MUSTER	3dnvB	1.000	0.807	2.677	threading_1	---FQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAK--------------
2	SPARKS	2wiub	0.958	0.807	2.268	threading_2	-----KIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMT------------LCDNLEW
3	PROSPECT2	3dnvB	0.986	0.807	1.304	threading_3	F---QKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAK--------------
4	PPA-I	3dnvB	1.000	0.807	3.332	threading_4	---FQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAK--------------
5	HHPRED-l	2bnm_A	0.210	0.920	1.897	threading_5	----K--TASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGELTLTQLGRIAHVLGTSIGALTPPAGNDDDGDERPDY-
6	HHPRED-g	1y9q_A	0.244	0.932	1.606	threading_6	----TDV-FKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDD
7	SP3	2wiub	0.958	0.807	2.406	threading_7	-----KIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMT------------LCDNLEW
8	SAM-T99	3dnvB	1.000	0.807	2.888	threading_8	---FQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAK--------------
9	MUSTER	2b5aA	0.260	0.875	2.652	threading_9	MINEIEI--KRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFRKMEEEN---------
10	SPARKS	3dnvb	1.000	0.807	2.263	threading_10	---FQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAK--------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.638 to 1y7yA TM-score=0.904 to native SCOP code=a.35.1.3	TM-score=0.638 to 1y7yA TM-score=0.904 to native SCOP code=a.35.1.3	TM-score=0.643 to 1y7yA TM-score=0.919 to native SCOP code=a.35.1.3	TM-score=0.640 to 1y7yA TM-score=0.906 to native SCOP code=a.35.1.3	TM-score=0.638 to 1y7yA TM-score=0.904 to native SCOP code=a.35.1.3

Experimental Structure

Download 2wiuB

SCOP code=a.35.1.3