Template-based Modeling Results for HSPQ_ECOLI

Submitted Primary Sequence

>Length 105
MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN
CCEEEECCCCEEEEEEECCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCHHEEEEECCCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN
432021111110100000010000001120212320024012323232001000001144122010000022022323333131120320031024312124244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN
1	MUSTER	1vbvA	1.000	0.733	3.419	threading_1	--ASKFGIGQQVRHSLLGYLGVVVDIDPV------------------AAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQ--------
2	SPARKS	1vbva	0.987	0.733	3.446	threading_2	--ASKFGIGQQVRHSLLGYLGVVVDIDPVA------------------APWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQ--------
3	PROSPECT2	1vbvA	0.961	0.733	1.539	threading_3	--ASKFGIGQQVRHSLLGYLGVVVDIDPVA------------------APWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIR--------KQ
4	PPA-I	1vbvA	0.987	0.733	8.596	threading_4	--ASKFGIGQQVRHSLLGYLGVVVDIDPVA------------------APWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQ--------
5	HHPRED-l	1vbv_A	1.000	0.733	9.679	threading_5	--ASKFGIGQQVRHSLLGYLGVVVDIDPV------------------AAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQ--------
6	HHPRED-g	1vbv_A	1.000	0.733	8.649	threading_6	--ASKFGIGQQVRHSLLGYLGVVVDIDPV------------------AAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQ--------
7	SP3	1vbva	0.987	0.733	1.792	threading_7	--ASKFGIGQQVRHSLLGYLGVVVDIDPVA------------------APWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQ--------
8	SAM-T99	1vbvA	0.986	0.705	4.332	threading_8	---SKFGIGQQVRHSLLGYLGVVVDIDPVA------------------APWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIR----------
9	MUSTER	1h3zA	0.151	0.886	0.933	threading_9	SERVNYKPGMRVLTKMSGFPSMVV--TES-KMTSVARKSKPK----RAGTFYPVIFFPNK---EYLWTGSDSLTPLTSEA--PKPKTASLIKAYKMAQSTPDLDS
10	SPARKS	3pfsa	0.110	0.952	0.802	threading_10	EDRGDLEPLELVWAKCRGYPALIIDPKPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRT--WQWLPRDKVLPLGVEDEGRKTSVQVAYDRAMIHLSRVR---

Predicted Tertiary Structure


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TM-score=0.854 to 1vbvA TM-score=0.984 to native SCOP code=b.34.17.1	TM-score=0.837 to 1vbvA TM-score=0.963 to native SCOP code=b.34.17.1	TM-score=0.837 to 1vbvA TM-score=0.963 to native SCOP code=b.34.17.1	TM-score=0.832 to 1vbvA TM-score=0.956 to native SCOP code=b.34.17.1	TM-score=0.837 to 1vbvA TM-score=0.963 to native SCOP code=b.34.17.1

Experimental Structure

Download 1vbvA

SCOP code=b.34.17.1