Template-based Modeling Results for LDRA_ECOLI


  Submitted Primary Sequence

>Length 35
MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK
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--------10--------20--------30
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK
45112001110110000000000000012113434
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--------10--------20--------30
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK
1MUSTER2hn8A0.2571.0001.586threading_1MPKQIVYWKQWLSLRNPILVFLKTRVLKRWRLFSK
2SPARKS1s5lx0.1760.9711.373threading_2IT-PSLKGFFIGLLSGAVVLGLTFAVLIAISQIDK
3PPA-I2l9uA0.1141.0001.152threading_3MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRH
4SP33dl8c0.1760.9711.048threading_4ATISVIIFSLAIGVYLWILDLTFTKIISFILSLR-
5MUSTER2l9uA0.1141.0001.459threading_5MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRH
6SPARKS1jb0m0.1720.8291.275threading_6LTDTQVYVALVIALLPAVLAFRLSTELYK------
7PPA-I2hn8A0.2571.0001.146threading_7MPKQIVYWKQWLSLRNPILVFLKTRVLKRWRLFSK
8SP31s5lx0.1760.9711.009threading_8-TITSLKGFFIGLLSGAVVLGLTFAVLIAISQIDK
9MUSTER1s5lx0.1760.9711.358threading_9IT-PSLKGFFIGLLSGAVVLGLTFAVLIAISQIDK
10SPARKS3dl8c0.1760.9711.171threading_10ATISVIIFSLAIGVYLWILDLTFTKIISFILSLR-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.724 to 1et1A
SCOP code=j.15.1.1
TM-score=0.574 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.611 to 1kv4A
SCOP code=j.4.1.3
TM-score=0.613 to 2jr8A
SCOP code=j.4.1.3
TM-score=0.746 to 1ijdB
SCOP code=f.3.1.1