Template-based Modeling Results for LDRB_ECOLI


  Submitted Primary Sequence

>Length 35
MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK
12345678901234567890123456789012345
--------10--------20--------30
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
12345678901234567890123456789012345
--------10--------20--------30
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK
45112001110110000000000000011113434
12345678901234567890123456789012345
--------10--------20--------30
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK
1MUSTER2hn8A0.2571.0001.594threading_1MPKQIVYWKQWLSLRNPILVFLKTRVLKRWRLFSK
2SPARKS1s5lx0.1760.9711.381threading_2IT-PSLKGFFIGLLSGAVVLGLTFAVLIAISQIDK
3PPA-I2l9uA0.1141.0001.163threading_3MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRH
4SP33dl8c0.1760.9711.051threading_4ATISVIIFSLAIGVYLWILDLTFTKIISFILSLR-
5MUSTER2l9uA0.1141.0001.472threading_5MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRH
6SPARKS1jb0m0.1720.8291.300threading_6LTDTQVYVALVIALLPAVLAFRLSTELYK------
7PPA-I2hn8A0.2571.0001.150threading_7MPKQIVYWKQWLSLRNPILVFLKTRVLKRWRLFSK
8SP31s5lx0.1760.9711.016threading_8-TITSLKGFFIGLLSGAVVLGLTFAVLIAISQIDK
9MUSTER1s5lx0.1760.9711.363threading_9IT-PSLKGFFIGLLSGAVVLGLTFAVLIAISQIDK
10SPARKS3dl8c0.1760.9711.178threading_10ATISVIIFSLAIGVYLWILDLTFTKIISFILSLR-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.733 to 1kv4A
SCOP code=j.4.1.3
TM-score=0.637 to 1kv4A
SCOP code=j.4.1.3
TM-score=0.603 to 1kv4A
SCOP code=j.4.1.3
TM-score=0.671 to 1kv4A
SCOP code=j.4.1.3
TM-score=0.741 to 1et1A
SCOP code=j.15.1.1