Template-based Modeling Results for NRDI_ECOLI


  Submitted Primary Sequence

>Length 136
MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA
CCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCHHHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA
4210000002141032003302121120213333413232100000001122222220032012002123122101000010121002000200210032020100010112113200320230022113322444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA
1MUSTER3n39C1.0000.9413.654threading_1--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQ------
2SPARKS3n39c1.0000.9414.362threading_2--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQ------
3PROSPECT23n39C1.0000.9412.540threading_3--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQ------
4PPA-I3n39C1.0000.9416.181threading_4--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQ------
5HHPRED-l1rlj_A0.3250.9263.723threading_5AMVQIIFDSKTGNVQRFVNKTGFQQIRKV---DEMDHVDTPFVLVTYTTNFGQ----VPASTQSFLEKY--AHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAK-
6HHPRED-g3n3a_C1.0000.9635.048threading_6--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQP---
7SP33n39c1.0000.9414.284threading_7--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQ------
8SAM-T993n39C1.0000.9416.219threading_8--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQ------
9MUSTER2x2oA0.4400.8533.077threading_9M--LVAYDSMTGNVKRFIHKLNMPAVQID----EDLVIDEDFILITYTTGFG----NVPERVLDFLERNN---KLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIA-------
10SPARKS1rlja0.3230.9343.694threading_10AMVQIIFDSKTGNVQRFVNKTGFQQIRK---VDEMDHVDTPFVLVTYTTNFG----QVPASTQSFLEKY--AHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKM

  Predicted Tertiary Structure

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TM-score=0.814 to 1rljA
TM-score=0.945 to native
SCOP code=c.23.5.7
TM-score=0.415 to 1hzdA
TM-score=0.282 to native
SCOP code=c.14.1.3
TM-score=0.814 to 1rljA
TM-score=0.945 to native
SCOP code=c.23.5.7
TM-score=0.814 to 1rljA
TM-score=0.945 to native
SCOP code=c.23.5.7
TM-score=0.814 to 1rljA
TM-score=0.945 to native
SCOP code=c.23.5.7

  Experimental Structure

Download 3n3aC
SCOP code=c.23.5.7