Template-based Modeling Results for PAAB_ECOLI

Submitted Primary Sequence

>Length 95
MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM
CCCCCCCEEEEEEECCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM
55423120010001233312120000010112200021002011223310000001012013122311231121231311210211202422444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM
1	MUSTER	3egrA	0.613	0.653	2.810	threading_1	--QKEWPLWEVFVRSKQGLEHKHCGSLHATD-AQQALHARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
2	SPARKS	3egra	0.645	0.653	3.694	threading_2	--QKEWPLWEVFVRSKQGLEHKHCGSLHATDAQQAL-HARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
3	PROSPECT2	3egrA	0.645	0.653	1.300	threading_3	--QKEWPLWEVFVRSKQGLEHKHCGSLHATDAQQALH-ARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
4	PPA-I	3egrA	0.613	0.653	6.547	threading_4	--QKEWPLWEVFVRSKQGLEHKHCGSLHATD-AQQALHARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
5	HHPRED-l	3egr_A	0.645	0.653	10.189	threading_5	--QKEWPLWEVFVRSKQGLEHKHCGSLHATDAQQALH-ARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
6	HHPRED-g	3egr_A	0.645	0.653	8.593	threading_6	--QKEWPLWEVFVRSKQGLEHKHCGSLHATDAQQALH-ARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
7	SP3	3egra	0.645	0.653	1.624	threading_7	--QKEWPLWEVFVRSKQGLEHKHCGSLHATDAQQAL-HARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
8	SAM-T99	3egrA	0.645	0.653	4.561	threading_8	--QKEWPLWEVFVRSKQGLEHKHCGSLHATDAQQAL-HARDVYTRRQEGVSIWVVPSTAITASAP------------------------------
9	MUSTER	1wgyA	0.172	0.916	0.767	threading_9	GSSGEEIFCHVYITE-----HSYV-SVKAKIAQEILKVVAEKIQYAEEDLALVAITFSEKHELQPNDLV-ISKEASGRIYKD-TLNPFAENSGPS
10	SPARKS	1bt0a	0.162	0.716	0.708	threading_10	M--------LIKVKTLTG--KEIEIDIEPTDT---IDRIKERV-EEKEGI-------------PPVQQRLIYAGKQLADDKTAKDYNIEGGSVHL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.449 to 2jxtA SCOP code=d.355.1.1	TM-score=0.455 to 2jxtA SCOP code=d.355.1.1	TM-score=0.455 to 2jxtA SCOP code=d.355.1.1	TM-score=0.459 to 2jxtA SCOP code=d.355.1.1	TM-score=0.449 to 2jxtA SCOP code=d.355.1.1