Template-based Modeling Results for RATB_ECOLI

Submitted Primary Sequence

>Length 96
MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK
CCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCHHHHCCCCCHHHCCEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK
532201010000113211002020342020210041010121123011230300000210412330231210100110211132023333342444
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK
1	MUSTER	2hj1B	0.525	0.833	3.332	threading_1	L-NQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLLAD---------------
2	SPARKS	2hj1a	0.519	0.802	3.642	threading_2	--NQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLL-----------------
3	PROSPECT2	2hj1A	0.519	0.802	1.402	threading_3	--NQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLL-----------------
4	PPA-I	2hj1B	0.525	0.833	8.142	threading_4	-LNQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLLAD---------------
5	HHPRED-l	2hj1_A	0.519	0.802	7.378	threading_5	--NQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLL-----------------
6	HHPRED-g	2hj1_A	0.519	0.802	7.060	threading_6	-N-QINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLL-----------------
7	SP3	2hj1a	0.519	0.802	1.898	threading_7	--NQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLL-----------------
8	SAM-T99	2hj1B	0.525	0.833	4.557	threading_8	-LNQINIEIAYAFPERYYLKSFQVDEGITVQTAITQSGILSQFPEIDLSTNKIGIFSRPIKLTDVLKEGDRIEIYRPLLAD---------------
9	MUSTER	1vjkA	0.205	0.760	1.362	threading_9	---SVKVKVKYRFRQLVDEEEIELPEGARVRDLIEE--IKKRHEKFKEEVFGIAVNGRYVSWDEELKDGDVVGVFPPV------------------
10	SPARKS	1vjka	0.219	0.760	1.212	threading_10	---SVKVKVKYARFRQLAEEEIELPEGARVRDLIEE--IKKRHEKFKEADVNIAVNGRYVSWDEELKDGDVVGVFPPV------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.755 to 2hj1B SCOP code=d.15.3.4	TM-score=0.738 to 2hj1B SCOP code=d.15.3.4	TM-score=0.721 to 2hj1B SCOP code=d.15.3.4	TM-score=0.721 to 2hj1B SCOP code=d.15.3.4	TM-score=0.719 to 2hj1B SCOP code=d.15.3.4