Template-based Modeling Results for RCNB_ECOLI


  Submitted Primary Sequence

>Length 112
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHCCCCCCCCCHHHCCCCCEECCHHHCCCCCCCCCCEEEEECCEEEEEECCCCEEEEEECCCEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
5521111000000000000000212122232222232322211122320331220132122330102102222022132111001011000000113020010010201226
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
1MUSTER2l1sA0.7230.7413.894threading_1-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
2SPARKS2l1sa0.7230.7414.897threading_2-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
3PROSPECT22l1sA0.7230.7411.741threading_3-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
4PPA-I2l1sA0.7230.7415.896threading_4-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
5HHPRED-l2l1s_A0.7200.7327.193threading_5-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYH-
6HHPRED-g2l1s_A0.7230.7417.264threading_6-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
7SP32l1sa0.7230.7411.978threading_7-----------------------------GAAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
8SAM-T992l1sA0.7320.7324.677threading_8------------------------------AAGIDQYALKEFTADFTQFHIGDTVPAMYLTPEYNIKQWQQRNLPAPDAGSHWTYMGGNYVLITDTEGKILKVYDGEIFYHR
9MUSTER1pvtA10.1690.7950.771threading_9--GHRETIREIQKVAYWLAIKGLSEANAGNDERPEGYEVKSVN------EYG-----DYDGPEYLL-------ITATGSRREVYEDDSKICLLHVLPGKHYEILHGN---GK
10SPARKS2k5ha0.0700.7680.797threading_10-------------------MGSSHHHHHHSSGRENLYFQGHMAARITGEPSKKAVSDRLIGRKGVVME------AISPQNSGLVKVDGETWRAVLDVGSVKAI-EGVKLVVE

  Predicted Tertiary Structure

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TM-score=0.408 to 1wmiA
SCOP code=d.298.1.2
TM-score=0.408 to 1wmiA
SCOP code=d.298.1.2
TM-score=0.408 to 1wmiA
SCOP code=d.298.1.2
TM-score=0.408 to 1wmiA
SCOP code=d.298.1.2
TM-score=0.408 to 1wmiA
SCOP code=d.298.1.2