Template-based Modeling Results for REND_ECOLI


  Submitted Primary Sequence

>Length 100
MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
CCHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEHHHHHHHHHHCCEEEEEECCCEEEEEECCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
5512200111012142000310032010100001200120132000002032111000111233223332112100320321210120021132223234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTGKEAIIHYLGTHKSFCAQDVAAVTGATVTSINQAAAKMARAGILVVDGKVWRTVYYRFATREEWEGKVSTNLIFKECRQSAAMKRVLRVYKRTSMGTQ
1MUSTER3f6vA0.1740.8601.088threading_1VPTRRRLVQLLT-SGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPR-KDGRFRYYRLDPQGLAQLRALFDSFW-----IDELDRLVAD-------TE
2SPARKS3cuoa0.1580.7601.149threading_2MSKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEG-LIDSQRDAQRILYSIKNEAVNA---IIATLKNVYC--------------------
3HHPRED-l2kko_A0.1410.8501.179threading_3NGRRLQILDLLAQ-GERAVEAIATATGMNLTTASANLQALKSGGLVEAR-REGTRQYYRIAGEDVARLFALVQVVADEHLEHHHH--------HH-----
4HHPRED-g1r1t_A0.1560.7701.165threading_4DPNRLRLLSLLAR-SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYR-KQGRHVYYQLQDHHIVALYQNALDHLQEC---------------------
5SAM-T991xmkA0.2210.6801.086threading_5AEIKEKICDYLFNVSDSSALNLAKNIGLTARDINAVLIDMERQGDVYRQGTTPPI--WHLTDKKRERMQI------------------------------
6MUSTER2oqgA0.2020.8901.057threading_6VGTRWEILTELGR-ADQSASSLATRLPVSRQAIAKHLNALQACGLVESV-KVGREIRYRALGAELNKTARTLERIGAEWDRRAAIKQIAES---------
7SPARKS3jtha0.1730.7501.083threading_7KAANERRLQILCHNQELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTR-KEAQTVYYTLKSEEVKA--------------IKLLHSLYC----------
8HHPRED-l1u2w_A0.1640.7301.178threading_8DENRAKITYALCQDEELCVCDIANILGVTIANASHHLRTLYKQGVVNFR-----LALYSLGDEHIRQ-------IMMI---------ALAHKKK------
9HHPRED-g1qbj_A0.2220.5401.026threading_9--QEQRILKFLEEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAPLWKIA--------------------------------------------
10MUSTER1okrB0.1220.9801.034threading_10TYAEWEVMNIIWMKKYASANNIIEEIQWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGG--FNSLVLNFVEKEDLSQ

  Predicted Tertiary Structure

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TM-score=0.678 to 1ulyA
SCOP code=a.4.5.58
TM-score=0.676 to 2p8tA
SCOP code=a.4.5.72
TM-score=0.724 to 1r1uC
SCOP code=a.4.5.5
TM-score=0.682 to 1r23A
SCOP code=a.4.5.5
TM-score=0.729 to 1xmkA
SCOP code=a.4.5.19