Template-based Modeling Results for RHAM_ECOLI


  Submitted Primary Sequence

>Length 104
MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
CCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEECCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCEECCCCCCCCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
43110010101330032013104400120030033010110000013230000000102133102111213101201310130010112222232312100204
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
1MUSTER1x8dA1.0001.0004.995threading_1MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
2SPARKS1x8da1.0001.0004.928threading_2MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
3PROSPECT21x8dA1.0001.0002.317threading_3MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
4PPA-I1x8dA1.0001.00011.675threading_4MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
5HHPRED-l1x8d_A1.0000.9907.646threading_5MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYL-
6HHPRED-g1x8d_A1.0001.0006.351threading_6MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
7SP31x8da1.0001.0004.778threading_7MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
8SAM-T991x8dA1.0001.0005.515threading_8MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP
9MUSTER2qlxA0.3710.9333.507threading_9LEKHAFKQ-LNPG-EAEYRKRHDEIWPELVDLLHQSGASDYSIHLDRETNTLFGVLTRPKDH-TASLPDHP-VKKWWAHAD--IATNPDNSPVQSDLVTLFH-P
10SPARKS2qlwa0.3670.9423.616threading_10TLEKHAFKQLNPGE-AEYRKRHDEIWPELVDLLHQSGASDYSIHLDRETNTLFGVLTRPKDH-TASLPDHPV-KKWWAHAD--IATNPDNSPVQSDLVTLFHP-

  Predicted Tertiary Structure

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TM-score=0.989 to 1x8dA
TM-score=0.989 to native
SCOP code=d.58.4.21
TM-score=0.989 to 1x8dA
TM-score=0.989 to native
SCOP code=d.58.4.21
TM-score=0.989 to 1x8dA
TM-score=0.989 to native
SCOP code=d.58.4.21
TM-score=0.989 to 1x8dA
TM-score=0.989 to native
SCOP code=d.58.4.21
TM-score=0.989 to 1x8dA
TM-score=0.989 to native
SCOP code=d.58.4.21

  Experimental Structure

Download 1x8dA
SCOP code=d.58.4.21